Incredible tissue diversity exists throughout Arabidopsis development; from seeds to, roots, leaves, stems, and reproductive tissues, and the composition and arrangement of cells and cell types within. To survey cell type diversity throughout development, we applied single-nucleus RNA sequencing to whole tissues and organs at ten distinct developmental timepoints, resulting in over 400,000 stringently filtered nuclei and 183 clusters.
This browser enables the exploration of each of our single nucleus transcriptome datasets, and may serve as a reference for cell type specific and developmental specific expression of genes throughout the entirety of Arabidopsis lifecycle.
For a brief tutorial on data exploration click here
Notice: when accessing larger datasets, it may take several minutes to load the dataset